March 2020 - ceph-users - lists.ceph.io

Problem with OSD::osd_op_tp thread had timed out and other connected issues

by Jan Pekař - Imatic

Hello, I have ceph cluster version 14.2.7 (3d58626ebeec02d8385a4cefb92c6cbc3a45bfe8) nautilus (stable) 4 nodes - each node 11 HDD, 1 SSD, 10Gbit network Cluster was empty, fresh install. We filled cluster with data (small blocks) using RGW. Cluster is now used for testing so no client was using it during my admin operations mentioned below After a while (7TB of data / 40M objects uploaded) we decided, that we increase pg_num from 128 to 256 to better spread data and to speedup this operation, I've set ceph config set mgr target_max_misplaced_ratio 1 so that whole cluster rebalance as quickly as it can. I have 3 issues/questions below: 1) I noticed, that manual increase from 128 to 256 caused approx. 6 OSD's to restart with logged heartbeat_map clear_timeout 'OSD::osd_op_tp thread 0x7f8c84b8b700' had suicide timed out after 150 after a while OSD's were back so I continued after a while with my tests. My question - increasing number of PG with maximal target_max_misplaced_ratio was too much for that OSDs? It is not recommended to do it this way? I had no problem with this increase before, but configuration of cluster was slightly different and it was luminous version. 2) Rebuild was still slow so I increased number of backfills ceph tell osd.* injectargs "--osd-max-backfills 10" and reduced recovery sleep time ceph tell osd.* injectargs "--osd-recovery-sleep-hdd 0.01" and after few hours I noticed, that some of my OSD's were restarted during recovery, in log I can see ... |2020-03-21 06:41:28.343 7fe1f8bee700 1 heartbeat_map is_healthy 'OSD::osd_op_tp thread 0x7fe1da154700' had timed out after 15 2020-03-21 06:41:28.343 7fe1f8bee700 1 heartbeat_map is_healthy 'OSD::osd_op_tp thread 0x7fe1da154700' had timed out after 15 2020-03-21 06:41:36.780 7fe1da154700 1 heartbeat_map clear_timeout 'OSD::osd_op_tp thread 0x7fe1da154700' had timed out after 15 2020-03-21 06:41:36.888 7fe1e7769700 0 log_channel(cluster) log [WRN] : Monitor daemon marked osd.7 down, but it is still running 2020-03-21 06:41:36.888 7fe1e7769700 0 log_channel(cluster) log [DBG] : map e3574 wrongly marked me down at e3573 2020-03-21 06:41:36.888 7fe1e7769700 1 osd.7 3574 start_waiting_for_healthy | I observed network graph usage and network utilization was low during recovery (10Gbit was not saturated). So lot of IOPS on OSD causes also hartbeat operation to timeout? I thought that OSD is using threads and HDD timeouts are not influencing heartbeats to other OSD's and MON. It looks like it is not true. 3) After OSD was wrongly marked down I can see that cluster has object degraded. There were no degraded object before that. Degraded data redundancy: 251754/117225048 objects degraded (0.215%), 8 pgs degraded, 8 pgs undersized It means that this OSD disconnection causes data degraded? How is it possible, when no OSD was lost. Data should be on that OSD and after peering should be everything OK. With luminous I had no problem, after OSD up degraded objects where recovered/found during few seconds and cluster was healthy within seconds. Thank you very much for additional info. I can perform additional tests you recommend because cluster is used for testing purpose now. With regards Jan Pekar -- ============ Ing. Jan Pekař jan.pekar(a)imatic.cz ---- Imatic | Jagellonská 14 | Praha 3 | 130 00 http://www.imatic.cz | +420326555326 ============ --

3 years, 2 months

4
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bluestore_default_buffered_write = true

by Adam Koczarski

Has anyone ever tried using this feature? I've added it to the [global] section of the ceph.conf on my POC cluster but I'm not sure how to tell if it's actually working. I did find a reference to this feature via Google and they had it in their [OSD] section?? I've tried that too.. TIA Adam

3 years, 2 months

2
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ceph qos

by 展荣臻（信泰）

Hi everyone: There are two types of qos in ceph(one based on tokenbucket algorithm,another based on mclock ). Which one I can use in nautilus production environment ？Thank you

3 years, 3 months

2
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ERROR: osd init failed: (1) Operation not permitted

by Ml Ml

Hello List, first of all: Yes - i made mistakes. Now i am trying to recover :-/ I had a healthy 3 node cluster which i wanted to convert to a single one. My goal was to reinstall a fresh 3 Node cluster and start with 2 nodes. I was able to healthy turn it from a 3 Node Cluster to a 2 Node cluster. Then the problems began. I started to change size=1 and min_size=1. Health was okay until here. Then over sudden both nodes got fenced...one node refused to boot, mons where missing, etc...to make long story short, here is where i am right now: root@node03:~ # ceph -s cluster b3be313f-d0ef-42d5-80c8-6b41380a47e3 health HEALTH_WARN 53 pgs stale 53 pgs stuck stale monmap e4: 2 mons at {0=10.15.15.3:6789/0,1=10.15.15.2:6789/0} election epoch 298, quorum 0,1 1,0 osdmap e6097: 14 osds: 9 up, 9 in pgmap v93644673: 512 pgs, 1 pools, 1193 GB data, 304 kobjects 1088 GB used, 32277 GB / 33366 GB avail 459 active+clean 53 stale+active+clean root@node03:~ # ceph osd tree ID WEIGHT TYPE NAME UP/DOWN REWEIGHT PRIMARY-AFFINITY -1 32.56990 root default -2 25.35992 host node03 0 3.57999 osd.0 up 1.00000 1.00000 5 3.62999 osd.5 up 1.00000 1.00000 6 3.62999 osd.6 up 1.00000 1.00000 7 3.62999 osd.7 up 1.00000 1.00000 8 3.62999 osd.8 up 1.00000 1.00000 19 3.62999 osd.19 up 1.00000 1.00000 20 3.62999 osd.20 up 1.00000 1.00000 -3 7.20998 host node02 3 3.62999 osd.3 up 1.00000 1.00000 4 3.57999 osd.4 up 1.00000 1.00000 1 0 osd.1 down 0 1.00000 9 0 osd.9 down 0 1.00000 10 0 osd.10 down 0 1.00000 17 0 osd.17 down 0 1.00000 18 0 osd.18 down 0 1.00000 my main mistakes seemd to be: -------------------------------- ceph osd out osd.1 ceph auth del osd.1 systemctl stop ceph-osd@1 ceph osd rm 1 umount /var/lib/ceph/osd/ceph-1 ceph osd crush remove osd.1 As far as i can tell, ceph waits and needs data from that OSD.1 (which i removed) root@node03:~ # ceph health detail HEALTH_WARN 53 pgs stale; 53 pgs stuck stale pg 0.1a6 is stuck stale for 5086.552795, current state stale+active+clean, last acting [1] pg 0.142 is stuck stale for 5086.552784, current state stale+active+clean, last acting [1] pg 0.1e is stuck stale for 5086.552820, current state stale+active+clean, last acting [1] pg 0.e0 is stuck stale for 5086.552855, current state stale+active+clean, last acting [1] pg 0.1d is stuck stale for 5086.552822, current state stale+active+clean, last acting [1] pg 0.13c is stuck stale for 5086.552791, current state stale+active+clean, last acting [1] [...] SNIP [...] pg 0.e9 is stuck stale for 5086.552955, current state stale+active+clean, last acting [1] pg 0.87 is stuck stale for 5086.552939, current state stale+active+clean, last acting [1] When i try to start ODS.1 manually, i get: -------------------------------------------- 2020-02-10 18:48:26.107444 7f9ce31dd880 0 ceph version 0.94.10 (b1e0532418e4631af01acbc0cedd426f1905f4af), process ceph-osd, pid 10210 2020-02-10 18:48:26.134417 7f9ce31dd880 0 filestore(/var/lib/ceph/osd/ceph-1) backend xfs (magic 0x58465342) 2020-02-10 18:48:26.184202 7f9ce31dd880 0 genericfilestorebackend(/var/lib/ceph/osd/ceph-1) detect_features: FIEMAP ioctl is supported and appears to work 2020-02-10 18:48:26.184209 7f9ce31dd880 0 genericfilestorebackend(/var/lib/ceph/osd/ceph-1) detect_features: FIEMAP ioctl is disabled via 'filestore fiemap' config option 2020-02-10 18:48:26.184526 7f9ce31dd880 0 genericfilestorebackend(/var/lib/ceph/osd/ceph-1) detect_features: syncfs(2) syscall fully supported (by glibc and kernel) 2020-02-10 18:48:26.184585 7f9ce31dd880 0 xfsfilestorebackend(/var/lib/ceph/osd/ceph-1) detect_feature: extsize is disabled by conf 2020-02-10 18:48:26.309755 7f9ce31dd880 0 filestore(/var/lib/ceph/osd/ceph-1) mount: enabling WRITEAHEAD journal mode: checkpoint is not enabled 2020-02-10 18:48:26.633926 7f9ce31dd880 1 journal _open /var/lib/ceph/osd/ceph-1/journal fd 20: 5367660544 bytes, block size 4096 bytes, directio = 1, aio = 1 2020-02-10 18:48:26.642185 7f9ce31dd880 1 journal _open /var/lib/ceph/osd/ceph-1/journal fd 20: 5367660544 bytes, block size 4096 bytes, directio = 1, aio = 1 2020-02-10 18:48:26.664273 7f9ce31dd880 0 <cls> cls/hello/cls_hello.cc:271: loading cls_hello 2020-02-10 18:48:26.732154 7f9ce31dd880 0 osd.1 6002 crush map has features 1107558400, adjusting msgr requires for clients 2020-02-10 18:48:26.732163 7f9ce31dd880 0 osd.1 6002 crush map has features 1107558400 was 8705, adjusting msgr requires for mons 2020-02-10 18:48:26.732167 7f9ce31dd880 0 osd.1 6002 crush map has features 1107558400, adjusting msgr requires for osds 2020-02-10 18:48:26.732179 7f9ce31dd880 0 osd.1 6002 load_pgs 2020-02-10 18:48:31.939810 7f9ce31dd880 0 osd.1 6002 load_pgs opened 53 pgs 2020-02-10 18:48:31.940546 7f9ce31dd880 -1 osd.1 6002 log_to_monitors {default=true} 2020-02-10 18:48:31.942471 7f9ce31dd880 1 journal close /var/lib/ceph/osd/ceph-1/journal 2020-02-10 18:48:31.969205 7f9ce31dd880 -1 ESC[0;31m ** ERROR: osd init failed: (1) Operation not permittedESC[0m Its mounted: /dev/sdg1 3.7T 127G 3.6T 4% /var/lib/ceph/osd/ceph-1 Is there any way i can get the OSD.1 back in? Thanks a lot, mario

3 years, 3 months

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Re: Excessive write load on mons after upgrade from 12.2.13 -> 14.2.7

by Dan van der Ster

This means it has been applied: # ceph osd dump -f json | jq .require_osd_release "nautilus" -- dan On Mon, Feb 17, 2020 at 11:10 AM Marc Roos <M.Roos(a)f1-outsourcing.eu> wrote: > > > How do you check if you issued this command in the past? > > > -----Original Message----- > To: ceph-users(a)ceph.io > Subject: [ceph-users] Re: Excessive write load on mons after upgrade > from 12.2.13 -> 14.2.7 > > Hi Peter, > > could be a totally different problem but did you run the command "ceph > osd require-osd-release nautilus" after the upgrade? > We had poor performance after upgrading to nautilus and running this > command fixed it. The same was reported by others for previous updates. > Here is my original message regarding this issue: > https://lists.ceph.io/hyperkitty/list/ceph-users@ceph.io/message/OYFRWSJXPV… > > We did not observe the master election problem though. > > _______________________________________________ > ceph-users mailing list -- ceph-users(a)ceph.io > To unsubscribe send an email to ceph-users-leave(a)ceph.io

3 years, 3 months

2
2
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RBD logs

by 陈旭

Hi guys, I deploy an efk cluster and use ceph as block storage in kubernetes, but RBD write iops sometimes becomes zero and last for a few minutes. I want to check logs about RBD so I add some config to ceph.conf and restart ceph. Here is my ceph.conf: [global] fsid = 53f4e1d5-32ce-4e9c-bf36-f6b54b009962 mon_initial_members = db-16-4-hzxs, db-16-5-hzxs, db-16-6-hzxs mon_host = 10.25.16.4,10.25.16.5,10.25.16.6 auth_cluster_required = cephx auth_service_required = cephx auth_client_required = cephx osd pool default size = 3 [client] debug rbd = 20 debug rbd mirror = 20 debug rbd replay = 20 log file = /var/log/ceph/client_rbd.log I can not get any logs in /var/log/ceph/client_rbd.log. I also try to execute 'ceph daemon osd.* config set debug_rbd 20’ and there is also no related logs in ceph-osd.log. How can I get useful logs about this question or How can I analyze this problem? Look forward to your reply. Thanks ////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// 声明：此邮件可能包含依图公司保密或特权信息，并且仅应发送至有权接收该邮件的收件人。如果您无权收取该邮件，您应当立即删除该邮件并通知发件人，您并被禁止传播、分发或复制此邮件以及附件。对于此邮件可能携带的病毒引起的任何损害，本公司不承担任何责任。此外，本公司不保证已正确和完整地传输此信息，也不接受任何延迟收件的赔偿责任。 ////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////// Notice: This email may contain confidential or privileged information of Yitu and was sent solely to the intended recipients. If you are unauthorized to receive this email, you should delete the email and contact the sender immediately. Any unauthorized disclosing, distribution, or copying of this email and attachment thereto is prohibited. Yitu does not accept any liability for any loss caused by possibly viruses in this email. E-mail transmission cannot be guaranteed to be secure or error-free and Yitu is not responsible for any delayed transmission.

3 years, 3 months

2
1
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Help! ceph-mon is blocked after shutting down and ip address changed

by occj＠qq.com

ceph version 14.2.4 (75f4de193b3ea58512f204623e6c5a16e6c1e1ba) nautilus (stable) os :CentOS Linux release 7.7.1908 (Core) single node ceph cluster with 1 mon,1mgr,1 mds,1rgw and 12osds , but only cephfs is used. ceph -s is blocked after shutting down the machine (192.168.0.104), then ip address changed to 192.168.1.6 I created the monmap with monmap tool and update the ceph.conf , hosts file and then start ceph-mon. and the ceph-mon log: ... 2019-12-11 08:57:45.170 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1285.14s 2019-12-11 08:57:50.170 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1290.14s 2019-12-11 08:57:55.171 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1295.14s 2019-12-11 08:58:00.171 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1300.14s 2019-12-11 08:58:05.172 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1305.14s 2019-12-11 08:58:10.171 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1310.14s 2019-12-11 08:58:15.173 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1315.14s 2019-12-11 08:58:20.173 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1320.14s 2019-12-11 08:58:25.174 7f952cdac700 1 mon.ceph-node1 at 0(leader).mds e34 no beacon from mds.0.10 (gid: 4384 addr: [v2:192.168.0.104:6898/4084823750,v1:192.168.0.104:6899/4084823750] state: up:active) since 1325.14s ... I changed IP back to 192.168.0.104 yeasterday, but all the same. # cat /etc/ceph/ceph.conf [client.libvirt] admin socket = /var/run/ceph/$cluster-$type.$id.$pid.$cctid.asok # must be writable by QEMU and allowed by SELinux or AppArmor log file = /var/log/ceph/qemu-guest-$pid.log # must be writable by QEMU and allowed by SELinux or AppArmor [client.rgw.ceph-node1.rgw0] host = ceph-node1 keyring = /var/lib/ceph/radosgw/ceph-rgw.ceph-node1.rgw0/keyring log file = /var/log/ceph/ceph-rgw-ceph-node1.rgw0.log rgw frontends = beast endpoint=192.168.1.6:8080 rgw thread pool size = 512 # Please do not change this file directly since it is managed by Ansible and will be overwritten [global] cluster network = 192.168.1.0/24 fsid = e384e8e6-94d5-4812-bfbb-d1b0468bdef5 mon host = [v2:192.168.1.6:3300,v1:192.168.1.6:6789] mon initial members = ceph-node1 osd crush chooseleaf type = 0 osd pool default crush rule = -1 public network = 192.168.1.0/24 [osd] osd memory target = 7870655146

3 years, 3 months

2
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Radosgw PubSub Traffic

by Dustin Guerrero

Hey all, We’ve been running some benchmarks against Ceph which we deployed using the Rook operator in Kubernetes. Everything seemed to scale linearly until a point where I see a single OSD receiving much higher CPU load than the other OSDs (nearly 100% saturation). After some investigation we noticed a ton of pubsub traffic in the strace coming from the RGW pods like so: [pid 22561] sendmsg(77, {msg_name(0)=NULL, msg_iov(3)=[{"\21\2)\0\0\0\10\0:\1\0\0\10\0\0\0\0\0\10\0\0\0\0\0\0\20\0\0-\321\211K"..., 73}, {"\200\0\0\0pubsub.user.ceph-user-wwITOk"..., 314}, {"\0\303\34[\360\314\233\2138\377\377\377\377\377\377\377\377", 17}], msg_controllen=0, msg_flags=0}, MSG_NOSIGNAL|MSG_MORE <unfinished …> I’ve checked other OSDs and only a single OSD receives these messages. I suspect its creating a bottleneck. Does anyone have an idea on why these are being generated or how to stop them? The pubsub sync module doesn’t appear to be enabled, and our benchmark is doing simple gets/puts/deletes. We’re running Ceph 14.2.5 nautilus Thank you!

3 years, 3 months

2
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OSD backups and recovery

by Ludek Navratil

HI all, what is the best approach for OSD backups and recovery? We use only Radosgw with S3 API and I need to backup the content of S3 buckets. Currently I sync s3 buckets to local filesystem and backup the content using Amanda. I believe that there must a better way to do this but I couldn't find it in docs. I know that one option is to setup an archive zone, but it requires an additional ceph cluster that needs to be maintained and looked after. I would rather avoid that. How can I backup an entire Ceph cluster? Or individual OSDs in the way that will allow me to recover the data correctly? Many thanks,Ludek

3 years, 3 months

4
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General question CephFS or RBD

by Willi Schiegel

Hello All, I have a HW RAID based 240 TB data pool with about 200 million files for users in a scientific institution. Data sizes range from tiny parameter files for scientific calculations and experiments to huge images of brain scans. There are group directories, home directories, Windows roaming profile directories organized in ZFS pools on Solaris operating systems, exported via NFS and Samba to Linux, macOS, and Windows clients. I would like to switch to CephFS because of the flexibility and expandability but I cannot find any recommendations for which storage backend would be suitable for all the functionality we have. Since I like the features of ZFS like immediate snapshots of very large data pools, quotas for each file system within hierarchical data trees and dynamic expandability by simply adding new disks or disk images without manual resizing would it be a good idea to create RBD images, map them onto the file servers and create zpools on the mapped images? I know that ZFS best works with raw disks but maybe a RBD image is close enough to a raw disk? Or would CephFS be the way to go? Can there be multiple CephFS pools for the group data folders and for the user's home directory folders for example or do I have to have everything in one single file space? Maybe someone can share his or her field experience? Thank you very much. Best regards Willi

3 years, 3 months

2
1
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ceph-users March 2020