3 Jul
2019
3 Jul
'19
4:58 p.m.
Hi,
We are experiencing very slow "rm" on client lately, and it's not clear
what is wrong. The symptom shows like this:
on client:
# cat /sys/kernel/debug/ceph/*/mdsc
3436737 mds0 rmdir #100216d0113/utils
(hpc/session/H9MKDmgVn2unmmR0Xox1SiGmABFKDmABFKDmmH9XDmABFKDmzmjnGo/pilot/radical/utils)
mds:
# ceph daemon mds.velikaponca dump_ops_in_flight
{
"ops": [
{
"description": "client_request(client.14321210:3436737
rmdir #0x100216d0113/utils 2019-07-03 09:48:02.000548 caller_uid=0,
caller_gid=0{})",
"initiated_at": "2019-07-03 09:48:02.001005",
"age": 4.046726,
"duration": 4.046759,
"type_data": {
"flag_point": "failed to xlock, waiting",
"reqid": "client.14321210:3436737",
"op_type": "client_request",
"client_info": {
"client": "client.14321210",
"tid": 3436737
},
"events": [
{
"time": "2019-07-03 09:48:02.001005",
"event": "initiated"
},
{
"time": "2019-07-03 09:48:02.001005",
"event": "header_read"
},
{
"time": "2019-07-03 09:48:02.001006",
"event": "throttled"
},
{
"time": "2019-07-03 09:48:02.001011",
"event": "all_read"
},
{
"time": "2019-07-03 09:48:02.001131",
"event": "dispatched"
},
{
"time": "2019-07-03 09:48:02.001261",
"event": "failed to wrlock, waiting"
},
{
"time": "2019-07-03 09:48:02.001744",
"event": "failed to xlock, waiting"
},
{
"time": "2019-07-03 09:48:02.010963",
"event": "failed to xlock, waiting"
}
]
}
}
],
"num_ops": 1
}
The client requests appear to be very fast, but rmdir tends to fail to
xclock frequently, and it takes up to 10s before the operation
completes, which slows down a lot the services running on the client,
and it's also not related to the load on ceph servers. Restarting mds
solves the issue for few minutes, but then it reappears.
The version is mimic 13.2.6, and the cluster is healthy, most of the
clients are on 5.1.* kernel. The server experiencing the issues is on
centos7 kernel 3.10.0-957.21.3.el7.x86_64, we have also tested it with
5.1.15 kernel showing the same symptoms.
Any ideas how to solve this problem?
Cheers,
Andrej
--
_____________________________________________________________
prof. dr. Andrej Filipcic, E-mail: Andrej.Filipcic(a)ijs.si
Department of Experimental High Energy Physics - F9
Jozef Stefan Institute, Jamova 39, P.o.Box 3000
SI-1001 Ljubljana, Slovenia
Tel.: +386-1-477-3674 Fax: +386-1-477-3166
-------------------------------------------------------------
9 Jul
9 Jul
6:36 p.m.
New subject: [Ceph-users] Re: cephfs client high latency rm, failed to xclock
Hi,
further debugging showed this: The complete deletion works very fast, if
creation and deletion is done on the same host. In our case, the
directories to be deleted are created on a cluster node, and the removal
is done on the central server. The problem seem to be correlated with
the kernel upgrade from 4.19.* to 5.1.* on the cluster nodes.
Any ideas?
Cheers,
Andrej
On 03/07/2019 09:58, Andrej Filipčič wrote:
Hi,
We are experiencing very slow "rm" on client lately, and it's not
clear what is wrong. The symptom shows like this:
on client:
# cat /sys/kernel/debug/ceph/*/mdsc
3436737 mds0 rmdir #100216d0113/utils
(hpc/session/H9MKDmgVn2unmmR0Xox1SiGmABFKDmABFKDmmH9XDmABFKDmzmjnGo/pilot/radical/utils)
mds:
# ceph daemon mds.velikaponca dump_ops_in_flight
{
"ops": [
{
"description": "client_request(client.14321210:3436737
rmdir #0x100216d0113/utils 2019-07-03 09:48:02.000548 caller_uid=0,
caller_gid=0{})",
"initiated_at": "2019-07-03 09:48:02.001005",
"age": 4.046726,
"duration": 4.046759,
"type_data": {
"flag_point": "failed to xlock, waiting",
"reqid": "client.14321210:3436737",
"op_type": "client_request",
"client_info": {
"client": "client.14321210",
"tid": 3436737
},
"events": [
{
"time": "2019-07-03 09:48:02.001005",
"event": "initiated"
},
{
"time": "2019-07-03 09:48:02.001005",
"event": "header_read"
},
{
"time": "2019-07-03 09:48:02.001006",
"event": "throttled"
},
{
"time": "2019-07-03 09:48:02.001011",
"event": "all_read"
},
{
"time": "2019-07-03 09:48:02.001131",
"event": "dispatched"
},
{
"time": "2019-07-03 09:48:02.001261",
"event": "failed to wrlock, waiting"
},
{
"time": "2019-07-03 09:48:02.001744",
"event": "failed to xlock, waiting"
},
{
"time": "2019-07-03 09:48:02.010963",
"event": "failed to xlock, waiting"
}
]
}
}
],
"num_ops": 1
}
The client requests appear to be very fast, but rmdir tends to fail to
xclock frequently, and it takes up to 10s before the operation
completes, which slows down a lot the services running on the client,
and it's also not related to the load on ceph servers. Restarting mds
solves the issue for few minutes, but then it reappears.
The version is mimic 13.2.6, and the cluster is healthy, most of the
clients are on 5.1.* kernel. The server experiencing the issues is on
centos7 kernel 3.10.0-957.21.3.el7.x86_64, we have also tested it with
5.1.15 kernel showing the same symptoms.
Any ideas how to solve this problem?
Cheers,
Andrej
--
_____________________________________________________________
prof. dr. Andrej Filipcic, E-mail: Andrej.Filipcic(a)ijs.si
Department of Experimental High Energy Physics - F9
Jozef Stefan Institute, Jamova 39, P.o.Box 3000
SI-1001 Ljubljana, Slovenia
Tel.: +386-1-477-3674 Fax: +386-1-477-3166
-------------------------------------------------------------
16 Jul
16 Jul
9:29 p.m.
New subject: [Ceph-users] Re: cephfs client high latency rm, failed to xclock
Hi,
Some more info, kernel 5.0.13 works fine, 5.1 series not. For a test, if
a linux kernel tarball is unpacked in cephfs on a 5.1 kernel node, the
complete removal of the tree on another machine takes almost 4 hours.
Unpacking on 5.0.13 kernel node and then removing on the server takes
few minutes. Unpacking and removing on the same 5.1 kernel node is also
fast.
So, something bad was introduced in 5.1 kernel series.
Cheers,
Andrej
On 09/07/2019 11:36, Andrej Filipčič wrote:
Hi,
further debugging showed this: The complete deletion works very fast,
if creation and deletion is done on the same host. In our case, the
directories to be deleted are created on a cluster node, and the
removal is done on the central server. The problem seem to be
correlated with the kernel upgrade from 4.19.* to 5.1.* on the cluster
nodes.
Any ideas?
Cheers,
Andrej
On 03/07/2019 09:58, Andrej Filipčič wrote:
--
_____________________________________________________________
prof. dr. Andrej Filipcic, E-mail: Andrej.Filipcic(a)ijs.si
Department of Experimental High Energy Physics - F9
Jozef Stefan Institute, Jamova 39, P.o.Box 3000
SI-1001 Ljubljana, Slovenia
Tel.: +386-1-477-3674 Fax: +386-1-477-3166
-------------------------------------------------------------
Hi,
We are experiencing very slow "rm" on client lately, and it's not
clear what is wrong. The symptom shows like this:
on client:
# cat /sys/kernel/debug/ceph/*/mdsc
3436737 mds0 rmdir #100216d0113/utils
(hpc/session/H9MKDmgVn2unmmR0Xox1SiGmABFKDmABFKDmmH9XDmABFKDmzmjnGo/pilot/radical/utils)
mds:
# ceph daemon mds.velikaponca dump_ops_in_flight
{
"ops": [
{
"description": "client_request(client.14321210:3436737
rmdir #0x100216d0113/utils 2019-07-03 09:48:02.000548 caller_uid=0,
caller_gid=0{})",
"initiated_at": "2019-07-03 09:48:02.001005",
"age": 4.046726,
"duration": 4.046759,
"type_data": {
"flag_point": "failed to xlock, waiting",
"reqid": "client.14321210:3436737",
"op_type": "client_request",
"client_info": {
"client": "client.14321210",
"tid": 3436737
},
"events": [
{
"time": "2019-07-03 09:48:02.001005",
"event": "initiated"
},
{
"time": "2019-07-03 09:48:02.001005",
"event": "header_read"
},
{
"time": "2019-07-03 09:48:02.001006",
"event": "throttled"
},
{
"time": "2019-07-03 09:48:02.001011",
"event": "all_read"
},
{
"time": "2019-07-03 09:48:02.001131",
"event": "dispatched"
},
{
"time": "2019-07-03 09:48:02.001261",
"event": "failed to wrlock, waiting"
},
{
"time": "2019-07-03 09:48:02.001744",
"event": "failed to xlock, waiting"
},
{
"time": "2019-07-03 09:48:02.010963",
"event": "failed to xlock, waiting"
}
]
}
}
],
"num_ops": 1
}
The client requests appear to be very fast, but rmdir tends to fail
to xclock frequently, and it takes up to 10s before the operation
completes, which slows down a lot the services running on the client,
and it's also not related to the load on ceph servers. Restarting mds
solves the issue for few minutes, but then it reappears.
The version is mimic 13.2.6, and the cluster is healthy, most of the
clients are on 5.1.* kernel. The server experiencing the issues is on
centos7 kernel 3.10.0-957.21.3.el7.x86_64, we have also tested it
with 5.1.15 kernel showing the same symptoms.
Any ideas how to solve this problem?
Cheers,
Andrej
1739
days inactive
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days old
2 comments
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Andrej Filipčič